From: pschloss Date: Thu, 4 Feb 2010 21:06:01 +0000 (+0000) Subject: test X-Git-Url: https://git.donarmstrong.com/?p=mothur.git;a=commitdiff_plain;h=df92022fc75c08b91cefa2c6ca4fd7b23eb480b0 test --- diff --git a/alignmentdb.cpp b/alignmentdb.cpp index 4b89acb..5c758ec 100644 --- a/alignmentdb.cpp +++ b/alignmentdb.cpp @@ -17,7 +17,7 @@ AlignmentDB::AlignmentDB(string fastaFileName, string method, int kmerSize, float gapOpen, float gapExtend, float match, float misMatch){ // This assumes that the template database is in fasta format, may try { // need to alter this in the future? longest = 0; - cout << longest; + ifstream fastaFile; openInputFile(fastaFileName, fastaFile);