From: Kathryn Iverson <kd.iverson@gmail.com>
Date: Wed, 20 Jun 2012 21:34:14 +0000 (-0400)
Subject: edited createRabund function
X-Git-Url: https://git.donarmstrong.com/?p=mothur.git;a=commitdiff_plain;h=8772a51e7ab31b1c49dada6d38baf1474444943c

edited createRabund function
---

diff --git a/mgclustercommand.cpp b/mgclustercommand.cpp
index a0f33d6..e5681ef 100644
--- a/mgclustercommand.cpp
+++ b/mgclustercommand.cpp
@@ -710,9 +710,16 @@ void MGClusterCommand::sortHclusterFiles(string unsortedDist, string unsortedOve
 //**********************************************************************************************************************
 
 RAbundVector MGClusterCommand::createRabund(ListVector list, map<string, int> nameMapCounts){
-    for(int i = 0; i < list->getNumBins(); i++) { 
-    
+    try {
+        RAbundVector rav;
+        for(int i = 0; i < list->getNumBins(); i++) {   rav.push_back(nameMapCounts[i]);    }
+        return rav;
     }
+    catch(exception& e) {
+		m->errorOut(e, "MGClusterCommand", "createRabund");
+		exit(1);
+	}
+    
 }
 
 //**********************************************************************************************************************