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(parent: b8ff3bc) | patch
added kruskal.wallis command. added worked on make.lefse. working of lefse command...
authorSarah Westcott <mothur.westcott@gmail.com>
Mon, 24 Jun 2013 18:31:29 +0000 (14:31 -0400)
committerSarah Westcott <mothur.westcott@gmail.com>
Mon, 24 Jun 2013 18:31:29 +0000 (14:31 -0400)
commitb25ede2ad307ae76f8a610443e0ec3ec69621ce7
tree9c4a845a9cb28ffa3dbe0c6fcdb9c73a6583a95ftree | snapshot
parentb8ff3bca0560a53832723f4621fcddef7ec4e499commit | diff
added kruskal.wallis command. added worked on make.lefse. working of lefse command. fixed bug in trim.oligos when there was an exact match to paired primers or barcodes that overlapped causing the sequence to be shorter than the barcodes and primers.  added design map class. added kruskal wallis and wilcoxon functions to linear algebra class.
17 files changed:
Mothur.xcodeproj/project.pbxproj diff | blob | history
commandfactory.cpp diff | blob | history
designmap.cpp [new file with mode: 0644] blob
designmap.h [new file with mode: 0644] blob
kruskalwalliscommand.cpp diff | blob | history
kruskalwalliscommand.h diff | blob | history
lefsecommand.cpp diff | blob | history
lefsecommand.h diff | blob | history
linearalgebra.cpp diff | blob | history
linearalgebra.h diff | blob | history
makecontigscommand.cpp diff | blob | history
makelefsecommand.cpp diff | blob | history
mothur.h diff | blob | history
mothurout.cpp diff | blob | history
mothurout.h diff | blob | history
setlogfilecommand.cpp diff | blob | history
trimoligos.cpp diff | blob | history
Mothur--16S microbiota sequencing software; mirror of main repository with my branches