X-Git-Url: https://git.donarmstrong.com/?p=mothur.git;a=blobdiff_plain;f=treegroupscommand.h;h=36c852bd8ef545894b9aa00245064eb112e236c6;hp=979612f4aea3aa41187ea520483afadfa05b1782;hb=cf9987b67aa49777a4c91c2d21f96e58bf17aa82;hpb=deba0af0ccdcb6005ed5b2b82649b137c63fbdf7

diff --git a/treegroupscommand.h b/treegroupscommand.h
index 979612f..36c852b 100644
--- a/treegroupscommand.h
+++ b/treegroupscommand.h
@@ -139,6 +139,7 @@ struct treeSharedData {
 	unsigned long long start;
 	unsigned long long end;
 	MothurOut* m;
+    int count;
 	
 	treeSharedData(){}
 	treeSharedData(MothurOut* mout, unsigned long long st, unsigned long long en, vector<string> est, vector<SharedRAbundVector*> lu) {
@@ -147,6 +148,7 @@ struct treeSharedData {
 		end = en;
         Estimators = est;
         thisLookup = lu;
+        count=0;
 	}
 };
 /**************************************************************************************************/
@@ -249,6 +251,8 @@ static DWORD WINAPI MyTreeSharedThreadFunction(LPVOID lpParam){
 		vector<SharedRAbundVector*> subset;
 		for (int k = pDataArray->start; k < pDataArray->end; k++) { // pass cdd each set of groups to compare
 			
+            pDataArray->count++;
+            
 			for (int l = 0; l < k; l++) {
 				
 				if (k != l) { //we dont need to similiarity of a groups to itself