X-Git-Url: https://git.donarmstrong.com/?p=mothur.git;a=blobdiff_plain;f=treecalculator.h;h=06abdb8e278e5dd4c04536444745f5f71679f092;hp=797c45723f835fea908fe2829397b682edc32c6f;hb=a8e2df1b96a57f5f29576b08361b86a96a8eff4f;hpb=163b300cfd7d4ca4e70c454be20f07b1d8346650

diff --git a/treecalculator.h b/treecalculator.h
index 797c457..06abdb8 100644
--- a/treecalculator.h
+++ b/treecalculator.h
@@ -12,6 +12,7 @@
 
 #include "mothur.h"
 #include "tree.h"
+#include "mothurout.h"
 
 /* The tree calculator class is the parent class for tree calculators in mothur. */ 
 
@@ -22,17 +23,21 @@ typedef vector<double> EstOutput;
 class TreeCalculator {
 
 public:
-	TreeCalculator(){};
+	TreeCalculator(){ m = MothurOut::getInstance(); }
 	TreeCalculator(string n) : name(n) {};
+	
 	virtual ~TreeCalculator(){};
-	virtual EstOutput getValues(Tree*) = 0;	
-	virtual EstOutput getValues(Tree*, string, string) = 0;
+	virtual EstOutput getValues(Tree*) { return data; }	
+	virtual EstOutput getValues(Tree*, int, string) { return data; }	
+	virtual EstOutput getValues(Tree*, string, string) { return data; }
+	virtual EstOutput getValues(Tree*, string, string, vector<double>&) { return data; }
 	
 	virtual string getName()		{	return name;	}
 		
 protected:
 	EstOutput data;
 	string name;
+	MothurOut* m;
 
 };