X-Git-Url: https://git.donarmstrong.com/?p=mothur.git;a=blobdiff_plain;f=summarysharedcommand.cpp;h=eea7b25c4ade2bd6a98f5cea0eaabd9b1787ede8;hp=05a5f7efa56c34e2ef452dd682aeacbbb4217ee3;hb=154e089bcd37c2c2f773e53ffb88a20170b27037;hpb=fe342304a0fdff3ab48226e1dcfdab95d3a94a64 diff --git a/summarysharedcommand.cpp b/summarysharedcommand.cpp index 05a5f7e..eea7b25 100644 --- a/summarysharedcommand.cpp +++ b/summarysharedcommand.cpp @@ -123,14 +123,14 @@ int SummarySharedCommand::execute(){ if (sumCalculators.size() == 0) { return 0; } if (format == "sharedfile") { - read = new ReadPhilFile(globaldata->inputFileName); + read = new ReadOTUFile(globaldata->inputFileName); read->read(&*globaldata); input = globaldata->ginput; order = input->getSharedOrderVector(); }else { //you are using a list and a groupfile - read = new ReadPhilFile(globaldata->inputFileName); + read = new ReadOTUFile(globaldata->inputFileName); read->read(&*globaldata); input = globaldata->ginput;