X-Git-Url: https://git.donarmstrong.com/?p=mothur.git;a=blobdiff_plain;f=suffixdb.hpp;h=3796801a73c852bd61b6785d453d1cce825a0e66;hp=4dc7e0fadd0cc1575250da05029d3ef32b388894;hb=1a20e24ee786195ab0e1cccd4f5aede7a88f3f4e;hpb=fdc1f6eaf544f695fc1511f24bddd7e6069c33ba

diff --git a/suffixdb.hpp b/suffixdb.hpp
index 4dc7e0f..3796801 100644
--- a/suffixdb.hpp
+++ b/suffixdb.hpp
@@ -20,8 +20,7 @@
 
 #include "mothur.h"
 #include "database.hpp"
-
-class SuffixTree;
+#include "suffixtree.hpp"
 
 class SuffixDB : public Database {
 	
@@ -33,11 +32,6 @@ public:
 	void generateDB() {}; //adding sequences generates the db
 	void addSequence(Sequence);
 	vector<int> findClosestSequences(Sequence*, int);
-	
-	#ifdef USE_MPI	
-	int MPISend(int); //just sends numSeqs
-	int MPIRecv(int);
-	#endif
 
 private:
 	vector<SuffixTree> suffixForest;