X-Git-Url: https://git.donarmstrong.com/?p=mothur.git;a=blobdiff_plain;f=splitgroupscommand.cpp;h=5c0103708bc99daaf6d0046435882c72a6c631a7;hp=c15ba3a4d588b3eedcaca7713c6d5acb8610aee2;hb=d1c97b8c04bb75faca1e76ffad60b37a4d789d3d;hpb=af0a94ea8f02421b2b73e77e68753a2b4c37768e

diff --git a/splitgroupscommand.cpp b/splitgroupscommand.cpp
index c15ba3a..5c01037 100644
--- a/splitgroupscommand.cpp
+++ b/splitgroupscommand.cpp
@@ -362,7 +362,7 @@ int SplitGroupCommand::runCount(){
                 for (int i = 0; i < thisSeqsGroups.size(); i++) {
                     if (m->inUsersGroups(thisSeqsGroups[i], Groups)) { //if this sequence belongs to a group we want them print
                         seq.printSequence(*(ffiles[thisSeqsGroups[i]]));
-                        int numSeqs = ct.getGroupCount(seq.getName(), Groups[i]);
+                        int numSeqs = ct.getGroupCount(seq.getName(), thisSeqsGroups[i]);
                         (*(cfiles[thisSeqsGroups[i]])) << seq.getName() << '\t' << numSeqs << '\t' << numSeqs << endl;
                     }
                 }