X-Git-Url: https://git.donarmstrong.com/?p=mothur.git;a=blobdiff_plain;f=splitabundcommand.cpp;h=580493b60a1e4d449a71b8689635e8ced4dea397;hp=2d37e8d459857f7f0161ba87111df0403ff9c827;hb=d1c97b8c04bb75faca1e76ffad60b37a4d789d3d;hpb=deba0af0ccdcb6005ed5b2b82649b137c63fbdf7

diff --git a/splitabundcommand.cpp b/splitabundcommand.cpp
index 2d37e8d..580493b 100644
--- a/splitabundcommand.cpp
+++ b/splitabundcommand.cpp
@@ -212,7 +212,7 @@ SplitAbundCommand::SplitAbundCommand(string option)  {
 			else if (countfile == "not found") { countfile = "";  }	
 			else {
                 m->setCountTableFile(countfile); 
-                ct.readTable(countfile);
+                ct.readTable(countfile, true);
             }
             
             if ((namefile != "") && (countfile != "")) {