X-Git-Url: https://git.donarmstrong.com/?p=mothur.git;a=blobdiff_plain;f=sortseqscommand.h;h=c1de84e3876464a2216dbfaeeec3b153048ae34c;hp=4ba8e4294d4b7d01bc8de7ba57cef84817f718ce;hb=a8e2df1b96a57f5f29576b08361b86a96a8eff4f;hpb=035f86272c776e1cccaa47021e26782e49cd41e7 diff --git a/sortseqscommand.h b/sortseqscommand.h index 4ba8e42..c1de84e 100644 --- a/sortseqscommand.h +++ b/sortseqscommand.h @@ -25,8 +25,9 @@ public: vector setParameters(); string getCommandName() { return "sort.seqs"; } string getCommandCategory() { return "Sequence Processing"; } - string getOutputFileNameTag(string, string); + string getHelpString(); + string getOutputPattern(string); string getCitation() { return "http://www.mothur.org/wiki/Sort.seqs"; } string getDescription() { return "puts sequences from a fasta, name, group, quality, flow or taxonomy file in the same order"; }