X-Git-Url: https://git.donarmstrong.com/?p=mothur.git;a=blobdiff_plain;f=sharedsorabund.cpp;h=9a1bd63d7bd2a5b459c6b9955afa77cebc23ed7c;hp=6748bfe86af75f13a5c206577ed5a7f0d51fa6ae;hb=b206f634aae1b4ce13978d203247fb64757d5482;hpb=50ed3b6104d5821d6184f882e1e1423d47dcbf10

diff --git a/sharedsorabund.cpp b/sharedsorabund.cpp
index 6748bfe..9a1bd63 100644
--- a/sharedsorabund.cpp
+++ b/sharedsorabund.cpp
@@ -23,17 +23,14 @@ EstOutput SorAbund::getValues(vector<SharedRAbundVector*> shared) {
 		data[0] = (2 * UVest[0] * UVest[1]) / ((float)(UVest[0] + UVest[1]));
 		
 		if (isnan(data[0]) || isinf(data[0])) { data[0] = 0; }
+		data[0] = 1-data[0];
 		
 		return data;
 	}
 	catch(exception& e) {
-		cout << "Standard Error: " << e.what() << " has occurred in the SorAbund class Function getValues. Please contact Pat Schloss at pschloss@microbio.umass.edu." << "\n";
+		m->errorOut(e, "SorAbund", "getValues");
 		exit(1);
 	}
-	catch(...) {
-		cout << "An unknown error has occurred in the SorAbund class Function getValues. Please contact Pat Schloss at pschloss@microbio.umass.edu." << "\n";
-		exit(1);
-	}	
 }
 
 /***********************************************************************/