X-Git-Url: https://git.donarmstrong.com/?p=mothur.git;a=blobdiff_plain;f=sharedrabundfloatvector.cpp;h=71c868b158ab41c2b8d72e7dac301998e2c39537;hp=b6d916a1900edc643291df4432728d3619a711a6;hb=a8e2df1b96a57f5f29576b08361b86a96a8eff4f;hpb=0caf3fbabaa3ece404f8ce77f4c883dc5b1bf1dc

diff --git a/sharedrabundfloatvector.cpp b/sharedrabundfloatvector.cpp
index b6d916a..71c868b 100644
--- a/sharedrabundfloatvector.cpp
+++ b/sharedrabundfloatvector.cpp
@@ -129,7 +129,6 @@ SharedRAbundFloatVector::SharedRAbundFloatVector(ifstream& f) : DataVector(), ma
 		while ((nextLabel == holdLabel) && (f.eof() != true)) {
 			f >> groupN >> num;
             
-            if (num != 1000) { break; }
 			count++;
 			
 			allGroups.push_back(groupN);
@@ -153,7 +152,6 @@ SharedRAbundFloatVector::SharedRAbundFloatVector(ifstream& f) : DataVector(), ma
 		
 		m->saveNextLabel = nextLabel;
 		m->setAllGroups(allGroups);
-	
 	}
 	catch(exception& e) {
 		m->errorOut(e, "SharedRAbundFloatVector", "SharedRAbundFloatVector");
@@ -193,6 +191,16 @@ float SharedRAbundFloatVector::getAbundance(int index){
 	return data[index].abundance;	
 }
 /***********************************************************************/
+//returns vector of abundances
+vector<float> SharedRAbundFloatVector::getAbundances(){
+    vector<float> abunds;
+    for (int i = 0; i < data.size(); i++) {
+        abunds.push_back(data[i].abundance);
+    }
+    
+	return abunds;
+}
+/***********************************************************************/
 individualFloat SharedRAbundFloatVector::get(int index){
 	return data[index];	
 }