X-Git-Url: https://git.donarmstrong.com/?p=mothur.git;a=blobdiff_plain;f=sharedkulczynski.cpp;h=5c91ddb65c654c5788c748596e87ddda94ae25f1;hp=c19df537a4f382f5404d8d2c643725599fba2478;hb=541bab1dac00688b4c3a8c4a95ab464412663c50;hpb=e4c80376cc4533f66c8dfc18f3e1a86a60ac17fe diff --git a/sharedkulczynski.cpp b/sharedkulczynski.cpp index c19df53..5c91ddb 100644 --- a/sharedkulczynski.cpp +++ b/sharedkulczynski.cpp @@ -21,7 +21,7 @@ EstOutput Kulczynski::getValues(vector shared) { data.resize(1,0); - for (int i = 0; i < shared[0]->size(); i++) { + for (int i = 0; i < shared[0]->getNumBins(); i++) { //store in temps to avoid multiple repetitive function calls tempA = shared[0]->getAbundance(i); tempB = shared[1]->getAbundance(i); @@ -33,7 +33,7 @@ EstOutput Kulczynski::getValues(vector shared) { if ((tempA != 0) && (tempB != 0)) { S12++; } } - data[0] = S12 / (float)(S1 + S2 - (2 * S12)); + data[0] = 1.0 - S12 / (float)(S1 + S2 - (2 * S12)); if (isnan(data[0]) || isinf(data[0])) { data[0] = 0; }