X-Git-Url: https://git.donarmstrong.com/?p=mothur.git;a=blobdiff_plain;f=sharedjackknife.cpp;h=0998db8fe3106bbb40c26dc8621d37030fb275c3;hp=012d2067ab94e7026a9673e77287c1629beafc8d;hb=df7e3ff9f68ef157b0328a2d353c3258c5d45d89;hpb=510b1cfc25cd79391d6973ca20c5ec25fb1bb3b2

diff --git a/sharedjackknife.cpp b/sharedjackknife.cpp
index 012d206..0998db8 100644
--- a/sharedjackknife.cpp
+++ b/sharedjackknife.cpp
@@ -88,8 +88,7 @@ EstOutput SharedJackknife::getValues(vector<SharedRAbundVector*> vectorShared){
 		SharedRAbundVector* shared1 = vectorShared[0];
 		SharedRAbundVector* shared2 = vectorShared[1];
 		if(numGroups == -1) {
-			globaldata = GlobalData::getInstance();
-			numGroups = globaldata->Groups.size();
+			numGroups = m->getNumGroups();
 		}
 
 		if(callCount == numGroups*(numGroups-1)/2) {
@@ -136,7 +135,7 @@ EstOutput SharedJackknife::getValues(vector<SharedRAbundVector*> vectorShared){
 	}
 		
 	catch(exception& e) {
-		errorOut(e, "SharedJackknife", "getValues");
+		m->errorOut(e, "SharedJackknife", "getValues");
 		exit(1);
 	}
 }