X-Git-Url: https://git.donarmstrong.com/?p=mothur.git;a=blobdiff_plain;f=sffmultiplecommand.h;h=ee83d727ad3b3a1e910f4b3cb633eae53938f87a;hp=4ab2c972557500c059b48ef38f712483f5731231;hb=1a20e24ee786195ab0e1cccd4f5aede7a88f3f4e;hpb=f509429e06e545bde69c97cacc0eb436775bd329 diff --git a/sffmultiplecommand.h b/sffmultiplecommand.h index 4ab2c97..ee83d72 100644 --- a/sffmultiplecommand.h +++ b/sffmultiplecommand.h @@ -26,8 +26,9 @@ public: vector setParameters(); string getCommandName() { return "sff.multiple"; } string getCommandCategory() { return "Sequence Processing"; } - string getOutputFileNameTag(string, string); + string getHelpString(); + string getOutputPattern(string); string getCitation() { return "http://www.mothur.org/wiki/Sff.multiple"; } string getDescription() { return "run multiple sff files through, sffinfo, trim.flow, shhh.flows and trim.seqs combining the results"; }