X-Git-Url: https://git.donarmstrong.com/?p=mothur.git;a=blobdiff_plain;f=sffinfocommand.cpp;fp=sffinfocommand.cpp;h=f267ba4b7859ed091f749456cb5495799ffc9ec0;hp=20caead668196fc75d10de1275956b7955bdd3b6;hb=a5d3e10e24e503483d8e85b54f0fd34b9308d31b;hpb=46626aa16c99fcdf2e3c76a61b80a5d4b0c3b898

diff --git a/sffinfocommand.cpp b/sffinfocommand.cpp
index 20caead..f267ba4 100644
--- a/sffinfocommand.cpp
+++ b/sffinfocommand.cpp
@@ -306,6 +306,7 @@ int SffInfoCommand::execute(){
 			
 			int start = time(NULL);
 			
+            filenames[s] = m->getFullPathName(filenames[s]);
 			m->mothurOut("Extracting info from " + filenames[s] + " ..." ); m->mothurOutEndLine();
 			
 			string accnos = "";