X-Git-Url: https://git.donarmstrong.com/?p=mothur.git;a=blobdiff_plain;f=sequenceparser.cpp;h=37891eb44a0b42c2b9f0879dfd084da1893c289b;hp=2aff07ebad9eb0b642a17d59289704b2c85ec9ac;hb=050a3ff02473a3d4c0980964e1a9ebe52e55d6b8;hpb=28bcfc4a41b8b82f66636587e0d4d355d07cbdd1 diff --git a/sequenceparser.cpp b/sequenceparser.cpp index 2aff07e..37891eb 100644 --- a/sequenceparser.cpp +++ b/sequenceparser.cpp @@ -310,8 +310,6 @@ vector SequenceParser::getNamesOfGroups(){ return groupMap->getNamesOfGr /************************************************************/ bool SequenceParser::isValidGroup(string g){ return groupMap->isValidGroup(g); } /************************************************************/ -string SequenceParser::getGroup(string g){ return groupMap->getGroup(g); } -/************************************************************/ int SequenceParser::getNumSeqs(string g){ try { map >::iterator it; @@ -402,7 +400,7 @@ int SequenceParser::getSeqs(string g, string filename, bool uchimeFormat=false){ if(m->control_pressed) { out.close(); m->mothurRemove(filename); return 1; } - out << ">" << nameVector[i].name << "/ab=" << nameVector[i].numIdentical << "/" << endl << nameVector[i].seq << endl; + out << ">" << nameVector[i].name << "/ab=" << nameVector[i].numIdentical << "/" << endl << nameVector[i].seq << endl; // } }else {