X-Git-Url: https://git.donarmstrong.com/?p=mothur.git;a=blobdiff_plain;f=seqerrorcommand.cpp;h=b31c4e0d89ecdb7243e9f4e42d3dc0af1d903450;hp=88794788a0472743665838721bb28b9b761f1765;hb=74d3aaf0f85080ea3cfb1f1871e706bab9f48392;hpb=03acfa01ede71b107817966fcf27cd728038b3c9

diff --git a/seqerrorcommand.cpp b/seqerrorcommand.cpp
index 8879478..b31c4e0 100644
--- a/seqerrorcommand.cpp
+++ b/seqerrorcommand.cpp
@@ -343,7 +343,7 @@ int SeqErrorCommand::execute(){
 				int startBase = report.getQueryStart();
 				int endBase = report.getQueryEnd();
 
-				quality = QualityScores(qualFile, origLength);
+				quality = QualityScores(qualFile);
 
 				if(!ignoreSeq){
 					quality.updateQScoreErrorMap(qScoreErrorMap, minCompare.sequence, startBase, endBase, minCompare.weight);