X-Git-Url: https://git.donarmstrong.com/?p=mothur.git;a=blobdiff_plain;f=removeseqscommand.h;h=8321212fff48bb240c54f1a1df4516b393f7216f;hp=8238c649489e3dff52371fa06ab8e2f49b93258f;hb=8bc3e5b38c2317a1715f53be22fa96455868c281;hpb=f663afa231c9bc1b5e18e0ea3bdd2b2ee784f5b2

diff --git a/removeseqscommand.h b/removeseqscommand.h
index 8238c64..8321212 100644
--- a/removeseqscommand.h
+++ b/removeseqscommand.h
@@ -17,7 +17,12 @@ class RemoveSeqsCommand : public Command {
 	public:
 	
 		RemoveSeqsCommand(string);	
-		~RemoveSeqsCommand(){};
+		RemoveSeqsCommand();
+		~RemoveSeqsCommand(){}
+		vector<string> getRequiredParameters();
+		vector<string> getValidParameters();
+		vector<string> getRequiredFiles();
+		map<string, vector<string> > getOutputFiles() { return outputTypes; }
 		int execute();
 		void help();	
 		
@@ -26,6 +31,7 @@ class RemoveSeqsCommand : public Command {
 		string accnosfile, fastafile, namefile, groupfile, alignfile, listfile, taxfile, outputDir;
 		bool abort, dups;
 		vector<string> outputNames;
+		map<string, vector<string> > outputTypes;
 		
 		int readFasta();
 		int readName();