X-Git-Url: https://git.donarmstrong.com/?p=mothur.git;a=blobdiff_plain;f=removeseqscommand.h;h=7aaff172800c43b160fe62b2b49c2035e08502f8;hp=1a6365dac35b9e18669f8827c4054268b9123d9e;hb=2ff2d03fbe46ce8cf2738bff4403a52be4f31e2f;hpb=a935b75dd890da5ae7f09e5e6179f90ab2955348

diff --git a/removeseqscommand.h b/removeseqscommand.h
index 1a6365d..7aaff17 100644
--- a/removeseqscommand.h
+++ b/removeseqscommand.h
@@ -35,12 +35,13 @@ class RemoveSeqsCommand : public Command {
 	
 	private:
 		set<string> names;
-		string accnosfile, fastafile, namefile, groupfile, countfile, alignfile, listfile, taxfile, qualfile, outputDir;
+		string accnosfile, fastafile, fastqfile, namefile, groupfile, countfile, alignfile, listfile, taxfile, qualfile, outputDir;
 		bool abort, dups;
 		vector<string> outputNames;
         map<string, string> uniqueMap;
 		
 		int readFasta();
+        int readFastq();
 		int readName();
 		int readGroup();
         int readCount();