X-Git-Url: https://git.donarmstrong.com/?p=mothur.git;a=blobdiff_plain;f=readcluster.h;h=7ea579c2fc1a250bba3500f7d6dc59d3ebed26f8;hp=eaf6b2dbb2bb422b67d6ffe55b3a1c854f7196d4;hb=1a20e24ee786195ab0e1cccd4f5aede7a88f3f4e;hpb=5cc45e630ccee2c3503e1bfe7e9b3524898cef8a diff --git a/readcluster.h b/readcluster.h index eaf6b2d..7ea579c 100644 --- a/readcluster.h +++ b/readcluster.h @@ -13,7 +13,7 @@ #include "mothur.h" #include "nameassignment.hpp" #include "listvector.hpp" -#include "globaldata.hpp" +#include "counttable.h" /******************************************************/ @@ -24,6 +24,7 @@ public: ReadCluster(string, float, string, bool); ~ReadCluster(); int read(NameAssignment*&); + int read(CountTable*&); string getOutputFile() { return OutPutFile; } void setFormat(string f) { format = f; } ListVector* getListVector() { return list; } @@ -37,6 +38,7 @@ private: bool sortWanted; int convertPhylip2Column(NameAssignment*&); + int convertPhylip2Column(CountTable*&); }; /******************************************************/