X-Git-Url: https://git.donarmstrong.com/?p=mothur.git;a=blobdiff_plain;f=rarecalc.h;h=8a0fb72b5ef946a14f343704f6e7c2b608305e3b;hp=99964ec07d4dd9912d1060be4f8a4b0c753822ea;hb=1a20e24ee786195ab0e1cccd4f5aede7a88f3f4e;hpb=58cf1d08fee8c64334979075fa57bcafb035a2ed

diff --git a/rarecalc.h b/rarecalc.h
index 99964ec..8a0fb72 100644
--- a/rarecalc.h
+++ b/rarecalc.h
@@ -17,13 +17,14 @@
 class RareCalc {
 
 public:
-	RareCalc(RAbundVector* b) : bins(b), numSeqs(b->getNumSeqs()), maxRank(b->getMaxRank()), numBins(b->getNumBins()) {	bMatrix = binomial(numSeqs+1);	};
+	RareCalc(RAbundVector* b) : bins(b), numSeqs(b->getNumSeqs()), maxRank(b->getMaxRank()), numBins(b->getNumBins()) {	m = MothurOut::getInstance(); bMatrix = m->binomial(numSeqs+1); }
 	EstOutput getValues(int);
-	string getName()	{	return "RareCalc";	}
+	string getName()	{	return "rarecalc";	}
 private:
 	RAbundVector* bins;
 	vector<vector<double> > bMatrix;
 	int numSeqs, maxRank, numBins;
+	MothurOut* m;
 };
 
 /***********************************************************************/