X-Git-Url: https://git.donarmstrong.com/?p=mothur.git;a=blobdiff_plain;f=randomforest.cpp;h=acf87dfebcd022d37cf6974f8331c7ad940a017a;hp=6f40b7c1361b3f366cca5971eeb709b0119b2240;hb=499f4ac6e321f9f03d4c3aa25c3b6880892c8b83;hpb=69cb74767d8f15d7715653b6eb2119e15b335977

diff --git a/randomforest.cpp b/randomforest.cpp
index 6f40b7c..acf87df 100644
--- a/randomforest.cpp
+++ b/randomforest.cpp
@@ -122,11 +122,7 @@ int RandomForest::getMissclassifications(string filename, map<int, string> intTo
             int realOutcome = dataSet[indexOfSample][numFeatures];
                                    
             if (majorityVotedOutcome != realOutcome) {             
-                //write to file
-                //dataSet[indexOfSample][];
-                
                 out << names[indexOfSample] << "\t" << intToTreatmentMap[majorityVotedOutcome] << "\t" << intToTreatmentMap[realOutcome] << endl;
-                //out << m->currentBinLabels[(int)globalVariableRanks[i].first] << '\t' << globalVariableImportanceList[globalVariableRanks[i].first] << endl;
                                 
             }
         }
@@ -135,7 +131,7 @@ int RandomForest::getMissclassifications(string filename, map<int, string> intTo
         return 0;
     }
 	catch(exception& e) {
-		m->errorOut(e, "RandomForest", "calcForrestErrorRate");
+		m->errorOut(e, "RandomForest", "getMissclassifications");
 		exit(1);
 	} 
 }
@@ -184,7 +180,7 @@ int RandomForest::calcForrestVariableImportance(string filename) {
         m->openOutputFile(filename, out);
         out <<"OTU\tMean decrease accuracy\n";
         for (int i = 0; i < globalVariableRanks.size(); i++) {
-            out << m->currentBinLabels[(int)globalVariableRanks[i].first] << '\t' << globalVariableImportanceList[globalVariableRanks[i].first] << endl;
+            out << m->currentSharedBinLabels[(int)globalVariableRanks[i].first] << '\t' << globalVariableImportanceList[globalVariableRanks[i].first] << endl;
         }
         out.close();
         return 0;