X-Git-Url: https://git.donarmstrong.com/?p=mothur.git;a=blobdiff_plain;f=quitcommand.cpp;h=2c302e9e6b4f195c7d4acb1df97fd6110ea02ad5;hp=99dc46be30ca9c282d82474e5021bdf4fc7f3c33;hb=b206f634aae1b4ce13978d203247fb64757d5482;hpb=510b1cfc25cd79391d6973ca20c5ec25fb1bb3b2

diff --git a/quitcommand.cpp b/quitcommand.cpp
index 99dc46b..2c302e9 100644
--- a/quitcommand.cpp
+++ b/quitcommand.cpp
@@ -10,38 +10,19 @@
 #include "quitcommand.h"
 
 //**********************************************************************************************************************
-
-QuitCommand::QuitCommand(string option){
-		abort = false;
+QuitCommand::QuitCommand(string option) {
+		abort = false; calledHelp = false;   
 		
 		//allow user to run help
-		if(option == "help") { help(); abort = true; }
-		
-		else if (option != "") { mothurOut("There are no valid parameters for the quit command."); mothurOutEndLine();  abort = true;  }
-
-}
-//**********************************************************************************************************************
+		if(option == "help") { help(); abort = true; calledHelp = true; }
+		else if(option == "citation") { citation(); abort = true; calledHelp = true;}
 
-void QuitCommand::help(){
-	try {
-		 mothurOut("The quit command will terminate mothur and should be in the following format: \n"); 
-		 mothurOut("quit() or quit\n\n");
-	}
-	catch(exception& e) {
-		errorOut(e, "QuitCommand", "help");
-		exit(1);
-	}
 }
-
 //**********************************************************************************************************************
-
 QuitCommand::~QuitCommand(){}
-
 //**********************************************************************************************************************
-
 int QuitCommand::execute(){
 	if (abort == true) { return 0; }
 	return 1;
 }
-
 //**********************************************************************************************************************