X-Git-Url: https://git.donarmstrong.com/?p=mothur.git;a=blobdiff_plain;f=qstat.cpp;h=e07cdb3fb860b96a17ba2972474f0abb8bf05d7e;hp=ed4471a8d18b983294bd3824832d093316fe40fa;hb=cf9987b67aa49777a4c91c2d21f96e58bf17aa82;hpb=c196b6b4768ccb84955d773ff0f22e4994d1ba7b

diff --git a/qstat.cpp b/qstat.cpp
index ed4471a..e07cdb3 100644
--- a/qstat.cpp
+++ b/qstat.cpp
@@ -31,8 +31,8 @@ EstOutput QStat::getValues(SAbundVector* rank){
 		int r3 = -1;
 		int r1Ind = 0;
 		int r3Ind = 0;
-		int sumSpec = 0;
-		int iqSum = 0;
+		double sumSpec = 0;
+		double iqSum = 0;
 		for(int i = 1; i < rank->size(); i++) {
 			if(r1 != -1 && r3 != -1)
 				i = rank->size();
@@ -52,7 +52,6 @@ EstOutput QStat::getValues(SAbundVector* rank){
 		}
 		
 		double qstat = (.5*r1 + iqSum + .5*r3)/log((double)r3Ind/r1Ind);
-		//cout << "QStat:\nQStatistic = " << qstat << "\n\n";
 		
 		data[0] = qstat;
 		if (isnan(data[0]) || isinf(data[0])) { data[0] = 0; }
@@ -60,13 +59,9 @@ EstOutput QStat::getValues(SAbundVector* rank){
 		return data;
 	}
 	catch(exception& e) {
-		cout << "Standard Error: " << e.what() << " has occurred in the QStat class Function getValues. Please contact Pat Schloss at pschloss@microbio.umass.edu." << "\n";
+		m->errorOut(e, "QStat", "getValues");
 		exit(1);
 	}
-	catch(...) {
-		cout << "An unknown error has occurred in the QStat class function getValues. Please contact Pat Schloss at pschloss@microbio.umass.edu." << "\n";
-		exit(1);
-	}	
 }
 
 /***********************************************************************/