X-Git-Url: https://git.donarmstrong.com/?p=mothur.git;a=blobdiff_plain;f=nast.hpp;h=9428aed0446ce1236d23342467c80950cf64ab7f;hp=4cf1b85b9524cd69f8c824143087bef79e0efb67;hb=1a20e24ee786195ab0e1cccd4f5aede7a88f3f4e;hpb=526a868606faa50caf86e7399f7554c0335b39e5 diff --git a/nast.hpp b/nast.hpp index 4cf1b85..9428aed 100644 --- a/nast.hpp +++ b/nast.hpp @@ -19,6 +19,7 @@ */ #include "mothur.h" +#include "mothurout.h" class Alignment; class Sequence; @@ -29,6 +30,7 @@ class Nast { public: Nast(Alignment*, Sequence*, Sequence*); + ~Nast(){}; float getSimilarityScore(); int getMaxInsertLength(); @@ -42,6 +44,7 @@ private: Sequence* templateSeq; int maxInsertLength; + MothurOut* m; }; /**************************************************************************************************/