X-Git-Url: https://git.donarmstrong.com/?p=mothur.git;a=blobdiff_plain;f=mgclustercommand.h;h=008bd222a0a91869e14895738ea852b383c0395f;hp=b5b295f1edb4495d321a7e614db1e8309d8bc481;hb=a8e2df1b96a57f5f29576b08361b86a96a8eff4f;hpb=28bcfc4a41b8b82f66636587e0d4d355d07cbdd1 diff --git a/mgclustercommand.h b/mgclustercommand.h index b5b295f..008bd22 100644 --- a/mgclustercommand.h +++ b/mgclustercommand.h @@ -31,8 +31,9 @@ public: vector setParameters(); string getCommandName() { return "mgcluster"; } string getCommandCategory() { return "Clustering"; } - string getOutputFileNameTag(string, string); + string getHelpString(); + string getOutputPattern(string); string getCitation() { return "Schloss PD, Handelsman J (2008). A statistical toolbox for metagenomics. BMC Bioinformatics 9: 34. \nhttp://www.mothur.org/wiki/Mgcluster"; } string getDescription() { return "cluster your sequences into OTUs using a blast file"; }