X-Git-Url: https://git.donarmstrong.com/?p=mothur.git;a=blobdiff_plain;f=matrixoutputcommand.h;h=90f120602e70dc04600b3048bab41bde21b21edc;hp=8a04c96a32ed6fa769a4e14474dfb624451751d1;hb=14cddf859d97118481161bf3e85a647976020758;hpb=4b54ce99af7db8019ea907cd7c2edf789369ada9

diff --git a/matrixoutputcommand.h b/matrixoutputcommand.h
index 8a04c96..90f1206 100644
--- a/matrixoutputcommand.h
+++ b/matrixoutputcommand.h
@@ -121,6 +121,7 @@ struct distSharedData {
 	unsigned long long start;
 	unsigned long long end;
 	MothurOut* m;
+    int count;
 	
 	distSharedData(){}
 	distSharedData(MothurOut* mout, unsigned long long st, unsigned long long en, vector<string> est, vector<SharedRAbundVector*> lu) {
@@ -129,6 +130,7 @@ struct distSharedData {
 		end = en;
         Estimators = est;
         thisLookup = lu;
+        count = 0;
 	}
 };
 /**************************************************************************************************/
@@ -230,7 +232,7 @@ static DWORD WINAPI MyDistSharedThreadFunction(LPVOID lpParam){
         		
 		vector<SharedRAbundVector*> subset;
 		for (int k = pDataArray->start; k < pDataArray->end; k++) { // pass cdd each set of groups to compare
-			
+			pDataArray->count++;
 			for (int l = 0; l < k; l++) {
 				
 				if (k != l) { //we dont need to similiarity of a groups to itself