X-Git-Url: https://git.donarmstrong.com/?p=mothur.git;a=blobdiff_plain;f=matrixoutputcommand.cpp;h=a53a3dcb92837f112771f44ef39219d9e36a277a;hp=310e32bf23e048c73ae37579ac2e8e2d1cb8b0ff;hb=c48d91112209b841444923670dca5454da0e2a4d;hpb=2cfb747aa8f63bde9c1114001e6d2e81ccd26178

diff --git a/matrixoutputcommand.cpp b/matrixoutputcommand.cpp
index 310e32b..a53a3dc 100644
--- a/matrixoutputcommand.cpp
+++ b/matrixoutputcommand.cpp
@@ -652,7 +652,7 @@ int MatrixOutputCommand::process(vector<SharedRAbundVector*> thisLookup){
             }
             
             if (subsample && (thisIter != 0)) {  
-                if((thisIter) % 100 == 0){	m->mothurOut(toString(thisIter)); m->mothurOutEndLine();		}
+                if((thisIter) % 100 == 0){	m->mothurOutJustToScreen(toString(thisIter)+"\n"); 		}
                 calcDistsTotals.push_back(calcDists);
                 for (int i = 0; i < calcDists.size(); i++) {
                     for (int j = 0; j < calcDists[i].size(); j++) {