X-Git-Url: https://git.donarmstrong.com/?p=mothur.git;a=blobdiff_plain;f=mantelcommand.h;h=33fa3ea21e91fa2663994947720080933fad3d61;hp=224265bc3539a53e16b322847772b8fe2cdbc280;hb=a8e2df1b96a57f5f29576b08361b86a96a8eff4f;hpb=ca9ac1d80c62f57270b0dcd49410ebe08a8aecd6

diff --git a/mantelcommand.h b/mantelcommand.h
index 224265b..33fa3ea 100644
--- a/mantelcommand.h
+++ b/mantelcommand.h
@@ -22,8 +22,12 @@ public:
 	vector<string> setParameters();
 	string getCommandName()			{ return "mantel";					}
 	string getCommandCategory()		{ return "Hypothesis Testing";		}
-	string getHelpString();	
 	
+	string getHelpString();	
+    string getOutputPattern(string);	
+	string getCitation() { return "McCune B, Grace JB, Urban DL (2002). Analysis of ecological communities. MjM Software Design: Gleneden Beach, OR. \nLegendre P, Legendre L (1998). Numerical Ecology. Elsevier: New York. \nhttp://www.mothur.org/wiki/Mantel"; }
+	string getDescription()		{ return "Mantel’s test for correlation between matrices"; }
+
 	int execute();
 	void help() { m->mothurOut(getHelpString()); }