X-Git-Url: https://git.donarmstrong.com/?p=mothur.git;a=blobdiff_plain;f=listvector.hpp;h=b2bc511cfd258da992f9f1b8a44971f4dd29e3e2;hp=e195f4e089f48afd94d3027470b8bf42b1e165a3;hb=b206f634aae1b4ce13978d203247fb64757d5482;hpb=fd282e6b4be2560f5b1bd154a9e8d24b798eefaf

diff --git a/listvector.hpp b/listvector.hpp
index e195f4e..b2bc511 100644
--- a/listvector.hpp
+++ b/listvector.hpp
@@ -1,12 +1,10 @@
 #ifndef LIST_H
 #define LIST_H
 
-#include <Carbon/Carbon.h>
 #include "datavector.hpp"
-#include <iostream>
-#include <map>
 
-/* This class is a child to datavector.  It represents OTU information at a certain distance. 
+/*	DataStructure for a list file.
+	This class is a child to datavector.  It represents OTU information at a certain distance. 
 	A list vector can be converted into and ordervector, rabundvector or sabundvector.
 	Each member of the internal container "data" represents an individual OTU.
 	So data[0] = "a,b,c,d,e,f".
@@ -22,7 +20,7 @@ public:
 	ListVector(int);
 //	ListVector(const ListVector&);
 	ListVector(string, vector<string>);
-	ListVector(const ListVector& lv) : DataVector(lv.label), data(lv.data), maxRank(lv.maxRank), numBins(lv.numBins), numSeqs(lv.numSeqs){};
+	ListVector(const ListVector& lv) : DataVector(lv.label), data(lv.data), maxRank(lv.maxRank), numBins(lv.numBins), numSeqs(lv.numSeqs), binLabels(lv.binLabels) {};
 	ListVector(ifstream&);
 	~ListVector(){};
 	
@@ -32,11 +30,14 @@ public:
 
 	void set(int, string);	
 	string get(int);
+    vector<string> getLabels();
+    void setLabels(vector<string>);
 	void push_back(string);
 	void resize(int);
 	void clear();
 	int size();
 	void print(ostream&);
+    void printHeaders(ostream&);
 	
 	RAbundVector getRAbundVector();
 	SAbundVector getSAbundVector();
@@ -47,6 +48,7 @@ private:
 	int maxRank;
 	int numBins;
 	int numSeqs;
+    vector<string> binLabels;
 
 };