X-Git-Url: https://git.donarmstrong.com/?p=mothur.git;a=blobdiff_plain;f=knn.cpp;h=81b21b265785c2f8a83392ee52e7aeffbc9d4370;hp=837fa6d18d4f1aed6cf34e5861942b4230c30dd1;hb=050a3ff02473a3d4c0980964e1a9ebe52e55d6b8;hpb=0caf3fbabaa3ece404f8ce77f4c883dc5b1bf1dc

diff --git a/knn.cpp b/knn.cpp
index 837fa6d..81b21b2 100644
--- a/knn.cpp
+++ b/knn.cpp
@@ -14,6 +14,7 @@ Knn::Knn(string tfile, string tempFile, string method, int kmerSize, float gapOp
 : Classify(), num(n), search(method) {
 	try {
 		threadID = tid;
+        shortcuts = true;
 		
 		//create search database and names vector
 		generateDatabaseAndNames(tfile, tempFile, method, kmerSize, gapOpen, gapExtend, match, misMatch);