X-Git-Url: https://git.donarmstrong.com/?p=mothur.git;a=blobdiff_plain;f=kmerdb.hpp;h=ead3d7e0b20d7b0ee070caebaad74aedeaae7dd3;hp=b64412d259a85870c57253249a4e355193476c9a;hb=615301e57c25e241356a9c2380648d117709458d;hpb=63e089e0b3aad1741bab60119ed7ccc784dce347

diff --git a/kmerdb.hpp b/kmerdb.hpp
index b64412d..ead3d7e 100644
--- a/kmerdb.hpp
+++ b/kmerdb.hpp
@@ -26,12 +26,17 @@ class KmerDB : public Database {
 	
 public:
 	KmerDB(string, int);
+	KmerDB();
 	~KmerDB();
 	
 	void generateDB();
 	void addSequence(Sequence);
 	vector<int> findClosestSequences(Sequence*, int);
 	void readKmerDB(ifstream&);
+	int getCount(int);  //returns number of sequences with that kmer number
+	vector<int> getSequencesWithKmer(int);  //returns vector of sequences that contain kmer passed in
+	int getReversed(int);  //returns reverse compliment kmerNumber 
+	int getMaxKmer() { return maxKmer; }
 	
 private: