X-Git-Url: https://git.donarmstrong.com/?p=mothur.git;a=blobdiff_plain;f=inputdata.h;h=658b21d8cdfe649d8434e883655ecd18922f2554;hp=e9deb9d202c1935c222e4f392f85f3f2781d81ca;hb=a8e2df1b96a57f5f29576b08361b86a96a8eff4f;hpb=74c78f9abd9e733f0c2f812efec97a76632fcbf8 diff --git a/inputdata.h b/inputdata.h index e9deb9d..658b21d 100644 --- a/inputdata.h +++ b/inputdata.h @@ -6,6 +6,7 @@ #include "sharedlistvector.h" #include "sharedordervector.h" #include "listvector.hpp" +#include "sharedrabundfloatvector.h" class InputData { @@ -15,12 +16,22 @@ public: InputData(string, string, string); ~InputData(); ListVector* getListVector(); + ListVector* getListVector(string); //pass the label you want + ListVector* getListVector(string, bool); //pass the label you want, reset filepointer SharedListVector* getSharedListVector(); - OrderVector* getOrderVector(); + SharedListVector* getSharedListVector(string); //pass the label you want + OrderVector* getOrderVector(); + OrderVector* getOrderVector(string); //pass the label you want SharedOrderVector* getSharedOrderVector(); + SharedOrderVector* getSharedOrderVector(string); //pass the label you want SAbundVector* getSAbundVector(); + SAbundVector* getSAbundVector(string); //pass the label you want RAbundVector* getRAbundVector(); + RAbundVector* getRAbundVector(string); //pass the label you want vector getSharedRAbundVectors(); + vector getSharedRAbundVectors(string); //pass the label you want + vector getSharedRAbundFloatVectors(); + vector getSharedRAbundFloatVectors(string); //pass the label you want private: string format; @@ -33,6 +44,8 @@ private: SAbundVector* sabund; RAbundVector* rabund; map orderMap; + string filename; + MothurOut* m; };