X-Git-Url: https://git.donarmstrong.com/?p=mothur.git;a=blobdiff_plain;f=hclustercommand.h;h=d1074070420fc89347a65b8fa8c0448c953c8881;hp=aeeb3bc9cb295d93bbec1c33f405dcab27e55673;hb=1a20e24ee786195ab0e1cccd4f5aede7a88f3f4e;hpb=0caf3fbabaa3ece404f8ce77f4c883dc5b1bf1dc diff --git a/hclustercommand.h b/hclustercommand.h index aeeb3bc..d107407 100644 --- a/hclustercommand.h +++ b/hclustercommand.h @@ -38,7 +38,9 @@ public: vector setParameters(); string getCommandName() { return "hcluster"; } string getCommandCategory() { return "Clustering"; } + string getHelpString(); + string getOutputPattern(string); string getCitation() { return "Sun Y, Cai Y, Liu L, Yu F, Farrell ML, Mckendree W, Farmerie W (2009). ESPRIT: estimating species richness using large collections of 16S rRNA pyrosequences. Nucleic Acids Res 37: e76. \nhttp://www.mothur.org/wiki/Hcluster"; } string getDescription() { return "cluster your sequences into OTUs using a distance matrix"; }