X-Git-Url: https://git.donarmstrong.com/?p=mothur.git;a=blobdiff_plain;f=getgroupcommand.cpp;h=1190f49d41036c3d3034d8555544725014ee49f0;hp=b39fb645154f97252e7d928c9862cde01553ab6b;hb=220dc345e493cddc569521111ce32ac4d965ab7f;hpb=23e60689fa4306234b3d05b116f25d198316d1ae

diff --git a/getgroupcommand.cpp b/getgroupcommand.cpp
index b39fb64..1190f49 100644
--- a/getgroupcommand.cpp
+++ b/getgroupcommand.cpp
@@ -103,7 +103,7 @@ GetgroupCommand::GetgroupCommand(string option)  {
 				sharedfile = m->getSharedFile(); 
 				if (sharedfile != "") { m->mothurOut("Using " + sharedfile + " as input file for the shared parameter."); m->mothurOutEndLine(); }
 				else { 	m->mothurOut("You have no current sharedfile and the shared parameter is required."); m->mothurOutEndLine(); abort = true; }
-			}
+			}else { m->setSharedFile(sharedfile); }
 			
 			
 			//if the user changes the output directory command factory will send this info to us in the output parameter