X-Git-Url: https://git.donarmstrong.com/?p=mothur.git;a=blobdiff_plain;f=getcurrentcommand.cpp;h=5f5235647d28168d4ca187189d5911266a24c71a;hp=9289ba6da677a6e91f989a3b15c5f407d32ce3f8;hb=86c838c428a9e7d26f902f5492738241fa72c4e7;hpb=6fa1725004b26c0af737a684462a55c40dcb11a4

diff --git a/getcurrentcommand.cpp b/getcurrentcommand.cpp
index 9289ba6..5f52356 100644
--- a/getcurrentcommand.cpp
+++ b/getcurrentcommand.cpp
@@ -135,6 +135,10 @@ int GetCurrentCommand::execute(){
 					m->setAccnosFile("");
 				}else if (types[i] == "taxonomy") {
 					m->setTaxonomyFile("");
+				}else if (types[i] == "flow") {
+					m->setFlowFile("");
+				}else if (types[i] == "processors") {
+					m->setProcessors("1");
 				}else if (types[i] == "all") {
 					m->clearCurrentFiles();
 				}else {