X-Git-Url: https://git.donarmstrong.com/?p=mothur.git;a=blobdiff_plain;f=filtersharedcommand.h;h=704655134c0bb548c66d70e8fb94336bb31c130c;hp=f97cbf94b374818da1089b9aa4fc596f1603b6d6;hb=cf9987b67aa49777a4c91c2d21f96e58bf17aa82;hpb=601d30778afd12a8dcdd0e2825d54754a3980cf4 diff --git a/filtersharedcommand.h b/filtersharedcommand.h index f97cbf9..7046551 100644 --- a/filtersharedcommand.h +++ b/filtersharedcommand.h @@ -34,12 +34,12 @@ public: void help() { m->mothurOut(getHelpString()); } private: - bool abort, pickedGroups, allLines, makeRare; + bool abort, pickedGroups, allLines, makeRare, keepties; set labels; //holds labels to be used string groups, label, outputDir, sharedfile; vector Groups, outputNames; - int minAbund, minTotal; - float minPercent; + int minAbund, minTotal, minSamples; + float minPercent, minPercentSamples, rarePercent; int processShared(vector&);