X-Git-Url: https://git.donarmstrong.com/?p=mothur.git;a=blobdiff_plain;f=fileoutput.cpp;h=a4a68a8ef25a66ca52052faf8a1e8e6221bec4af;hp=c2432acaaf039b9ef9ac59b287cd55649f606105;hb=1a20e24ee786195ab0e1cccd4f5aede7a88f3f4e;hpb=260ae19c36cb11a53ddc5a75b5e507f8dd8b31d6

diff --git a/fileoutput.cpp b/fileoutput.cpp
index c2432ac..a4a68a8 100644
--- a/fileoutput.cpp
+++ b/fileoutput.cpp
@@ -15,7 +15,7 @@ ThreeColumnFile::~ThreeColumnFile(){
 	
 	inFile.close();
 	outFile.close();
-	remove(outName.c_str());
+	m->mothurRemove(outName);
 }
 
 /***********************************************************************/
@@ -78,7 +78,7 @@ void ThreeColumnFile::resetFile(){
 		}
 		counter = 1;
 		
-		remove(inName.c_str());
+		m->mothurRemove(inName);
 		renameOk = rename(outName.c_str(), inName.c_str());
 		
 		//renameFile(outName, inName);
@@ -102,7 +102,7 @@ ColumnFile::~ColumnFile(){
 	
 	inFile.close();
 	outFile.close();
-	remove(outName.c_str());
+	m->mothurRemove(outName);
 }
 
 /***********************************************************************/
@@ -182,7 +182,7 @@ void ColumnFile::resetFile(){
 		}
 		counter = 1;
 		
-		remove(inName.c_str());
+		m->mothurRemove(inName);
 		renameOk = rename(outName.c_str(), inName.c_str());
 		
 		//renameFile(outName, inName);
@@ -206,7 +206,7 @@ SharedThreeColumnFile::~SharedThreeColumnFile(){
 	
 	inFile.close();
 	outFile.close();
-	remove(outName.c_str());
+	m->mothurRemove(outName);
 }
 
 /***********************************************************************/
@@ -270,7 +270,7 @@ void SharedThreeColumnFile::resetFile(){
 		}
 		counter = 1;
 		
-		remove(inName.c_str());
+		m->mothurRemove(inName);
 		renameOk = rename(outName.c_str(), inName.c_str());
 		
 		//renameFile(outName, inName);
@@ -295,7 +295,7 @@ OneColumnFile::~OneColumnFile(){
 	
 	inFile.close();
 	outFile.close();
-	remove(outName.c_str());	
+	m->mothurRemove(outName);	
 }
 
 /***********************************************************************/
@@ -357,7 +357,7 @@ void OneColumnFile::resetFile(){
 		}	
 		counter = 1;
 		
-		remove(inName.c_str());
+		m->mothurRemove(inName);
 		renameOk = rename(outName.c_str(), inName.c_str());
 		
 		//renameFile(outName, inName);
@@ -382,7 +382,7 @@ SharedOneColumnFile::~SharedOneColumnFile(){
 	
 	inFile.close();
 	outFile.close();
-	remove(outName.c_str());	
+	m->mothurRemove(outName);	
 }
 
 /***********************************************************************/
@@ -454,7 +454,7 @@ void SharedOneColumnFile::resetFile(){
 		}	
 		counter = 1;
 
-		remove(inName.c_str());
+		m->mothurRemove(inName);
 		renameOk = rename(outName.c_str(), inName.c_str());
 		
 		//renameFile(outName, inName);