X-Git-Url: https://git.donarmstrong.com/?p=mothur.git;a=blobdiff_plain;f=distancecommand.cpp;h=67ad7beb77b69d72f11914579246eb35dfa707e4;hp=0c9d011503370886d2f802d2903c72f985cbc40e;hb=163b300cfd7d4ca4e70c454be20f07b1d8346650;hpb=99bd02d78eaf21b01420c6f99e38efc7fa4e9e17

diff --git a/distancecommand.cpp b/distancecommand.cpp
index 0c9d011..67ad7be 100644
--- a/distancecommand.cpp
+++ b/distancecommand.cpp
@@ -309,18 +309,12 @@ void DistanceCommand::appendFiles(string temp, string filename) {
 	
 		//open output file in append mode
 		openOutputFileAppend(filename, output);
-		
-		//open temp file for reading
 		openInputFile(temp, input);
 		
-		string line;
-		//read input file and write to output file
-		while(input.eof() != true) {
-			getline(input, line); //getline removes the newline char
-			if (line != "") {
-				output << line << endl;   // Appending back newline char 
-			}
-		}	
+		while(char c = input.get()){
+			if(input.eof())		{	break;			}
+			else				{	output << c;	}
+		}
 		
 		input.close();
 		output.close();
@@ -334,4 +328,4 @@ void DistanceCommand::appendFiles(string temp, string filename) {
 		exit(1);
 	}	
 }
-/**************************************************************************************************/
\ No newline at end of file
+/**************************************************************************************************/