X-Git-Url: https://git.donarmstrong.com/?p=mothur.git;a=blobdiff_plain;f=deuniquetreecommand.h;h=849b3d7fef9bfbaa9cb97aaf4e2d38cf1f0bf5c4;hp=5131c114986e67c70c43019c44f67830c5ce1e4b;hb=df7e3ff9f68ef157b0328a2d353c3258c5d45d89;hpb=0cc0c01eb5127ef2b09b894e1f224ccc1d70bef0

diff --git a/deuniquetreecommand.h b/deuniquetreecommand.h
index 5131c11..849b3d7 100644
--- a/deuniquetreecommand.h
+++ b/deuniquetreecommand.h
@@ -12,7 +12,6 @@
 
 
 #include "command.hpp"
-#include "treemap.h"
 #include "sharedutilities.h"
 #include "readtree.h"
 
@@ -26,15 +25,17 @@ public:
 	vector<string> setParameters();
 	string getCommandName()			{ return "deunique.tree";		}
 	string getCommandCategory()		{ return "Hypothesis Testing";		}
+	
 	string getHelpString();	
+    string getOutputPattern(string);	
 	string getCitation() { return "http://www.mothur.org/wiki/Deunique.tree"; }
+	string getDescription()		{ return "add the redundant sequence names back into a tree of unique sequences"; }
 	
 	int execute();
 	void help() { m->mothurOut(getHelpString()); }
 	
 	
 private:
-	TreeMap* tmap;
 	int numUniquesInName;
 	
 	bool abort;