X-Git-Url: https://git.donarmstrong.com/?p=mothur.git;a=blobdiff_plain;f=degapseqscommand.h;h=3b03c9b0ca1d8a61704dd3c13885d12d8204100a;hp=db93b02a299aae60666b1993469f7e00cdc31a58;hb=050a3ff02473a3d4c0980964e1a9ebe52e55d6b8;hpb=ca9ac1d80c62f57270b0dcd49410ebe08a8aecd6

diff --git a/degapseqscommand.h b/degapseqscommand.h
index db93b02..3b03c9b 100644
--- a/degapseqscommand.h
+++ b/degapseqscommand.h
@@ -22,8 +22,12 @@ public:
 	vector<string> setParameters();
 	string getCommandName()			{ return "degap.seqs";		}
 	string getCommandCategory()		{ return "Sequence Processing";		}
-	string getHelpString();	
 	
+	string getHelpString();	
+    string getOutputPattern(string);	
+	string getCitation() { return "http://www.mothur.org/wiki/Degap.seqs"; }
+	string getDescription()		{ return "removes gap characters from sequences"; }
+
 	int execute(); 
 	void help() { m->mothurOut(getHelpString()); }