X-Git-Url: https://git.donarmstrong.com/?p=mothur.git;a=blobdiff_plain;f=deconvolutecommand.h;fp=deconvolutecommand.h;h=b6bda8faa00a274369e7a23803440025c241e612;hp=0b6eb5e1f8fbce6e0f9ba9c5cccaee56739990dc;hb=cd37904452dc95b183ff313ff05720c562902487;hpb=0470f6d037aacb3563c3f7010708120a4a67d4e6

diff --git a/deconvolutecommand.h b/deconvolutecommand.h
index 0b6eb5e..b6bda8f 100644
--- a/deconvolutecommand.h
+++ b/deconvolutecommand.h
@@ -11,7 +11,6 @@
 
 #include "command.hpp"
 #include "fastamap.h"
-#include "globaldata.hpp"
 
 /* The unique.seqs command reads a fasta file, finds the duplicate sequences and outputs a names file
 	containing 2 columns.  The first being the groupname and the second the list of identical sequence names. */ 
@@ -26,17 +25,12 @@ public:
 	void help();	
 	
 private:
-	GlobalData* globaldata;
 	FastaMap* fastamap;
 	ifstream in;
 	ofstream out, outFasta;
 	string filename, outputFileName, outFastafile;
-	OptionParser* parser;
-	map<string, string> parameters;
-	map<string, string>::iterator it;
-	bool abort;
-
 
+	bool abort;
 };
 
 #endif