X-Git-Url: https://git.donarmstrong.com/?p=mothur.git;a=blobdiff_plain;f=database.hpp;h=49f39035e0aa95d6739616c0a6804858b53cdf9e;hp=580c3f2d4587ba80b8286d5b46968d6faa3818c3;hb=615301e57c25e241356a9c2380648d117709458d;hpb=d3aed959ca3b68890eeb7b815e24210bcfeb256c diff --git a/database.hpp b/database.hpp index 580c3f2..49f3903 100644 --- a/database.hpp +++ b/database.hpp @@ -45,7 +45,6 @@ class Database { public: Database(); - Database(const Database& db) : numSeqs(db.numSeqs), longest(db.longest), searchScore(db.searchScore), results(db.results), Scores(db.Scores) { m = MothurOut::getInstance(); } virtual ~Database(); virtual void generateDB() = 0; virtual void addSequence(Sequence) = 0; //add sequence to search engine @@ -58,6 +57,7 @@ public: virtual void readKmerDB(ifstream&){}; virtual void setNumSeqs(int i) { numSeqs = i; } virtual vector getSequencesWithKmer(int){ vector filler; return filler; }; + virtual int getReversed(int) { return 0; } virtual int getMaxKmer(){ return 1; } protected: