X-Git-Url: https://git.donarmstrong.com/?p=mothur.git;a=blobdiff_plain;f=collectcommand.h;h=ee1b914ee1594b4997a7706be60606e686fda305;hp=d250126551f88a74bcdc7afebde65763e424aab7;hb=a8e2df1b96a57f5f29576b08361b86a96a8eff4f;hpb=e150b0b0664caec517485ee6d69dcdade6dcae77

diff --git a/collectcommand.h b/collectcommand.h
index d250126..ee1b914 100644
--- a/collectcommand.h
+++ b/collectcommand.h
@@ -37,8 +37,11 @@ public:
 	vector<string> setParameters();
 	string getCommandName()			{ return "collect.single";			}
 	string getCommandCategory()		{ return "OTU-Based Approaches";	}
-	string getCitation() { return "http://www.mothur.org/wiki/Collect.single"; }
+	string getCitation() { return "Schloss PD, Handelsman J (2006). Introducing SONS, A tool that compares the membership of microbial communities. Appl Environ Microbiol 72: 6773-9. \nhttp://www.mothur.org/wiki/Collect.single"; }
+	
 	string getHelpString();	
+    string getOutputPattern(string);	
+	string getDescription()		{ return "generates collector's curves using calculators, that describe the richness, diversity, and other features of individual samples"; }
 	
 	int execute(); 
 	void help() { m->mothurOut(getHelpString()); }