X-Git-Url: https://git.donarmstrong.com/?p=mothur.git;a=blobdiff_plain;f=collectcommand.h;h=ee1b914ee1594b4997a7706be60606e686fda305;hp=1d8734fa5d713ad4535e067af55d3c56d699573c;hb=a8e2df1b96a57f5f29576b08361b86a96a8eff4f;hpb=f687723a8357916e86a05116978e6869b039ce36 diff --git a/collectcommand.h b/collectcommand.h index 1d8734f..ee1b914 100644 --- a/collectcommand.h +++ b/collectcommand.h @@ -38,8 +38,9 @@ public: string getCommandName() { return "collect.single"; } string getCommandCategory() { return "OTU-Based Approaches"; } string getCitation() { return "Schloss PD, Handelsman J (2006). Introducing SONS, A tool that compares the membership of microbial communities. Appl Environ Microbiol 72: 6773-9. \nhttp://www.mothur.org/wiki/Collect.single"; } - string getOutputFileNameTag(string, string); + string getHelpString(); + string getOutputPattern(string); string getDescription() { return "generates collector's curves using calculators, that describe the richness, diversity, and other features of individual samples"; } int execute();