X-Git-Url: https://git.donarmstrong.com/?p=mothur.git;a=blobdiff_plain;f=collectcommand.h;fp=collectcommand.h;h=20c863b81dfd79fad597cd6e1e83571256873969;hp=773bdae5c1d0b71bdad01e4403d3af3702274e70;hb=8bc3e5b38c2317a1715f53be22fa96455868c281;hpb=f663afa231c9bc1b5e18e0ea3bdd2b2ee784f5b2

diff --git a/collectcommand.h b/collectcommand.h
index 773bdae..20c863b 100644
--- a/collectcommand.h
+++ b/collectcommand.h
@@ -38,7 +38,12 @@ class CollectCommand : public Command {
 	
 public:
 	CollectCommand(string);	
+	CollectCommand();
 	~CollectCommand();
+	vector<string> getRequiredParameters();
+	vector<string> getValidParameters();
+	vector<string> getRequiredFiles();
+	map<string, vector<string> > getOutputFiles() { return outputTypes; }
 	int execute();	
 	void help();
 	
@@ -52,6 +57,8 @@ private:
 	vector<Display*> cDisplays;
 	int abund, size;
 	float freq;
+	vector<string> outputNames;
+	map<string, vector<string> > outputTypes;
 
 	bool abort, allLines;
 	set<string> labels; //holds labels to be used