X-Git-Url: https://git.donarmstrong.com/?p=mothur.git;a=blobdiff_plain;f=clustercommand.h;h=96b7c08861f216862de0c1e600d07fed463eb56a;hp=a5b792ea7c8a3e35345606765aaa3ede84916a86;hb=df7e3ff9f68ef157b0328a2d353c3258c5d45d89;hpb=90708fe9701e3827e477c82fb3652539c3bf2a0d

diff --git a/clustercommand.h b/clustercommand.h
index a5b792e..96b7c08 100644
--- a/clustercommand.h
+++ b/clustercommand.h
@@ -35,8 +35,9 @@ public:
 	vector<string> setParameters();
 	string getCommandName()			{ return "cluster";		}
 	string getCommandCategory()		{ return "Clustering";	}
-	string getOutputFileNameTag(string, string);
+	
 	string getHelpString();	
+    string getOutputPattern(string);	
 	string getCitation() { return "Schloss PD, Westcott SL (2011). Assessing and improving methods used in OTU-based approaches for 16S rRNA gene sequence analysis. Appl Environ Microbiol 77:3219.\nSchloss PD, Handelsman J (2005). Introducing DOTUR, a computer program for defining operational taxonomic units and estimating species richness. Appl Environ Microbiol 71: 1501-6.\nhttp://www.mothur.org/wiki/Cluster"; }
 	string getDescription()		{ return "cluster your sequences into OTUs using a distance matrix"; }