X-Git-Url: https://git.donarmstrong.com/?p=mothur.git;a=blobdiff_plain;f=clearcut.h;h=f3124e3b83f0be0903b4640291f94aa62685b4d9;hp=2710a8dd206c1f623fa44c64b72071a3a67ed6f9;hb=d1c97b8c04bb75faca1e76ffad60b37a4d789d3d;hpb=51d85e945d26324e50d6406829ce006ccc9eb1c0

diff --git a/clearcut.h b/clearcut.h
index 2710a8d..f3124e3 100644
--- a/clearcut.h
+++ b/clearcut.h
@@ -1,3 +1,6 @@
+
+
+
 /*
  * clearcut.h
  *
@@ -47,10 +50,11 @@
 #ifndef _INC_CLEARCUT_H_
 #define _INC_CLEARCUT_H_ 1
 
+extern "C" {
+
 #include "common.h"
 #include "cmdargs.h"
 
-
 #define NJ_VERSION "1.0.9"
 
 
@@ -180,11 +184,8 @@ typedef struct _STRUCT_NJ_VERTEX {
 } NJ_VERTEX;
 
 
-
-
-
-
 /* some function prototypes */
+int clearcut_main(int, char**);  
 
 /* core function for performing Relaxed Neighbor Joining */
 NJ_TREE *
@@ -272,6 +273,8 @@ NJ_min_transform(DMAT *dmat,
 		 long int *ret_i,
 		 long int *ret_j);
 
+}
+
 #endif /* _INC_CLEARCUT_H_ */
 
 
@@ -279,3 +282,4 @@ NJ_min_transform(DMAT *dmat,
 
 
 
+