X-Git-Url: https://git.donarmstrong.com/?p=mothur.git;a=blobdiff_plain;f=chimeraslayer.cpp;h=61ad0e0ce7626512e3d9e1cd4e70288acaee1049;hp=b334f909a7411d6dd00b3eda311740b7e93a80b8;hb=48335c6b6ecee614c30d22751c2880953c20e2f4;hpb=a4f05f09c250323132a4b9427f41a3ededaec634

diff --git a/chimeraslayer.cpp b/chimeraslayer.cpp
index b334f90..61ad0e0 100644
--- a/chimeraslayer.cpp
+++ b/chimeraslayer.cpp
@@ -259,6 +259,7 @@ int ChimeraSlayer::doPrep() {
 		
 			//generate blastdb
 			databaseLeft = new BlastDB(-1.0, -1.0, 1, -3);
+
 			for (int i = 0; i < templateSeqs.size(); i++) { 	databaseLeft->addSequence(*templateSeqs[i]);	}
 			databaseLeft->generateDB();
 			databaseLeft->setNumSeqs(templateSeqs.size());
@@ -385,6 +386,7 @@ vector<Sequence*> ChimeraSlayer::getTemplate(Sequence* q) {
 			
 			//generate blastdb
 			databaseLeft = new BlastDB(-1.0, -1.0, 1, -3);
+
 			for (int i = 0; i < thisTemplate.size(); i++) { if (m->control_pressed) { return thisTemplate; }  databaseLeft->addSequence(*thisTemplate[i]);	}
 			databaseLeft->generateDB();
 			databaseLeft->setNumSeqs(thisTemplate.size());